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dc.contributor.authorHe, Hongli
dc.contributor.authorCrabbe, M. James C.
dc.contributor.authorRen, Zhumei
dc.date.accessioned2022-09-12T08:20:51Z
dc.date.available2022-09-10T00:00:00Z
dc.date.available2022-09-12T08:20:51Z
dc.date.issued2022-09-10
dc.identifier.citationHe H, Crabbe MJC, Ren Z (2022) 'Detoxification gene families at the genome-wide level of Rhus gall aphid Schlechtendalia chinensis', Genes, 13 (9) 1627en_US
dc.identifier.issn2073-4425
dc.identifier.pmid36140795
dc.identifier.doi10.3390/genes13091627
dc.identifier.urihttp://hdl.handle.net/10547/625527
dc.description.abstractThe Rhus gall aphid Schlechtendalia chinensis uses the species Rhus chinensis as its primary host plant, on which galls are produced. The galls have medicinal properties and can be used in various situations due to their high tannin content. Detoxification enzymes play significant roles in the insect lifecycle. In this study, we focused on five detoxification gene families, i.e., glutathione-Stransferase (GST), ABC transporter (ABC), Carboxylesterase (CCE), cyto-chrome P450 (CYP), and UDP-glycosyltransferase (UDP), and manually annotated 144 detoxification genes of S. chinensis using genome-wide techniques. The detoxification genes appeared mostly on chromosome 1, where a total of two pair genes were identified to show tandem duplications. There were 38 gene pairs between genomes of S. chinensis and Acyrthosiphon pisum in the detoxification gene families by collinear comparison. Ka/Ks ratios showed that detoxification genes of S. chinensis were mainly affected by purification selection during evolution. The gene expression numbers of P450s and ABCs by transcriptome sequencing data were greater, while gene expression of CCEs was the highest, suggesting they might be important in the detoxification process. Our study has firstly identified the genes of the different detoxification gene families in the S. chinensis genome, and then analyzed their general features and expression, demonstrating the importance of the detoxification genes in the aphid and providing new information for further research.en_US
dc.description.sponsorshipThis study was partially supported by The National Natural Science Foundation of China (31870366), Shanxi International Science and Technology Cooperation Project (201803D421051), Research Project Supported by Shanxi Scholarship Council of China (2020-018), the National High Technology Research and Development “863” Program (2014AA021802).en_US
dc.language.isoenen_US
dc.publisherMDPIen_US
dc.relation.urlhttps://www.mdpi.com/2073-4425/13/9/1627en_US
dc.relation.urlhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9498883/
dc.rightsGreen - can archive pre-print and post-print or publisher's version/PDF
dc.rightsAttribution-NonCommercial-NoDerivatives 4.0 International*
dc.rights.urihttp://creativecommons.org/licenses/by-nc-nd/4.0/*
dc.subjectgeneticsen_US
dc.subjectmedicinal plantsen_US
dc.subjectflowering plantsen_US
dc.subjectSubject Categories::C410 Applied Geneticsen_US
dc.titleDetoxification gene families at the genome-wide level of Rhus gall aphid Schlechtendalia chinensisen_US
dc.typeArticleen_US
dc.identifier.eissn2073-4425
dc.contributor.departmentShanxi Universityen_US
dc.contributor.departmentOxford Universityen_US
dc.contributor.departmentUniversity of Bedfordshireen_US
dc.identifier.journalGenesen_US
dc.identifier.pmcidPMC9498883
dc.date.updated2022-09-12T08:16:44Z
dc.description.notegold open access


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