Discovery of a high-altitude ecotype and ancient lineage of Arabidopsis thaliana from Tibet

5.00
Hdl Handle:
http://hdl.handle.net/10547/622464
Title:
Discovery of a high-altitude ecotype and ancient lineage of Arabidopsis thaliana from Tibet
Authors:
Zeng, Liyan; Gu, Zhuoya; Xu, Min; Zhao, Ning; Zhu, Weidong; Yonezawa, Takahiro; Liu, Tianmeng; Qiong, Lha; Tersing, Tashi; Xu, Lingli; Zhang, Yang; Xu, Rongyan; Sun, Ningyu; Huang, Yanyan; Lei, Jiankun; Zhang, Liang; Xie, Feng; Zhang, Fang; Gu, Hongya; Geng, Yu-peng; Hasegawa, Masami; Yang, Ziheng; Crabbe, M. James C. ( 0000-0003-3609-1963 ) ; Chen, Fan; Zhong, Yang
Abstract:
Arabidopsis thaliana (A. thaliana) has long been a model species for dicotyledon study, and was the first flowering plant to get its genome completed sequenced [1]. Although most wild A. thaliana are collected in Europe, several studies have found a rapid A. thaliana west-east expansion from Central Asia [2]. The Qinghai-Tibet Plateau (QTP) is close to Central Asia and known for its high altitude, unique environments and biodiversity [3]. However, no wild-type A. thaliana had been either discovered or sequenced from QTP. Studies on the A. thaliana populations collected under 2000 m asl have shown that the adaptive variations associated with climate and altitudinal gradients [4]. Hence a high-altitude A. thaliana provides a precious natural material to investigate the evolution and adaptation process. Here, we present the genome of a new ecotype of A. thaliana collected in the Gongga County, Tibet (4200 m asl) (Fig. 1a), to demonstrate its evolutionary history and adaptation to highaltitude regions.
Affiliation:
Fudan University; Tibet University; Institute of Forest Inventory, Lhasa; Three Gorges Center for Food and Drug Control; Institute of Mathematical Statistics, Tokyo; Tibet Museum of Natural Science; University of Illinois at Urbana-Champaign; Soochow University; Chinese Academy of Sciences; Peking University; Yunnan University; University College London; University of Oxford; University of Bedfordshire; Shanghai Center for Bioinformation Technology
Citation:
Zeng L., Gu Z., Xu M., Zhao N., Zhu W., Yonezawa T., Liu T., Qiong L., Tersing T., Xu L., Zhang Y., Xu R., Sun N., Huang Y., Lei J., Zhang L., Xie F., Zhang F., Gu H., Geng Y., Hasegawa M., Yang Z., Crabbe M.J.C., Chen F., Zhong Y. (2017) 'Discovery of a high-altitude ecotype and ancient lineage of Arabidopsis thaliana from Tibet', Science Bulletin, 62, pp.1628-1630.
Publisher:
Elsevier
Journal:
Science Bulletin
Issue Date:
29-Dec-2017
URI:
http://hdl.handle.net/10547/622464
DOI:
10.1016/j.scib.2017.10.007
Additional Links:
http://www.sciencedirect.com/science/article/pii/S2095927317305236?via=ihub
Type:
Article
Language:
en
ISSN:
2095-9273
Appears in Collections:
Biomedical and biological science

Full metadata record

DC FieldValue Language
dc.contributor.authorZeng, Liyanen
dc.contributor.authorGu, Zhuoyaen
dc.contributor.authorXu, Minen
dc.contributor.authorZhao, Ningen
dc.contributor.authorZhu, Weidongen
dc.contributor.authorYonezawa, Takahiroen
dc.contributor.authorLiu, Tianmengen
dc.contributor.authorQiong, Lhaen
dc.contributor.authorTersing, Tashien
dc.contributor.authorXu, Linglien
dc.contributor.authorZhang, Yangen
dc.contributor.authorXu, Rongyanen
dc.contributor.authorSun, Ningyuen
dc.contributor.authorHuang, Yanyanen
dc.contributor.authorLei, Jiankunen
dc.contributor.authorZhang, Liangen
dc.contributor.authorXie, Fengen
dc.contributor.authorZhang, Fangen
dc.contributor.authorGu, Hongyaen
dc.contributor.authorGeng, Yu-pengen
dc.contributor.authorHasegawa, Masamien
dc.contributor.authorYang, Zihengen
dc.contributor.authorCrabbe, M. James C.en
dc.contributor.authorChen, Fanen
dc.contributor.authorZhong, Yangen
dc.date.accessioned2018-01-16T12:44:06Z-
dc.date.available2018-01-16T12:44:06Z-
dc.date.issued2017-12-29-
dc.identifier.citationZeng L., Gu Z., Xu M., Zhao N., Zhu W., Yonezawa T., Liu T., Qiong L., Tersing T., Xu L., Zhang Y., Xu R., Sun N., Huang Y., Lei J., Zhang L., Xie F., Zhang F., Gu H., Geng Y., Hasegawa M., Yang Z., Crabbe M.J.C., Chen F., Zhong Y. (2017) 'Discovery of a high-altitude ecotype and ancient lineage of Arabidopsis thaliana from Tibet', Science Bulletin, 62, pp.1628-1630.en
dc.identifier.issn2095-9273-
dc.identifier.doi10.1016/j.scib.2017.10.007-
dc.identifier.urihttp://hdl.handle.net/10547/622464-
dc.description.abstractArabidopsis thaliana (A. thaliana) has long been a model species for dicotyledon study, and was the first flowering plant to get its genome completed sequenced [1]. Although most wild A. thaliana are collected in Europe, several studies have found a rapid A. thaliana west-east expansion from Central Asia [2]. The Qinghai-Tibet Plateau (QTP) is close to Central Asia and known for its high altitude, unique environments and biodiversity [3]. However, no wild-type A. thaliana had been either discovered or sequenced from QTP. Studies on the A. thaliana populations collected under 2000 m asl have shown that the adaptive variations associated with climate and altitudinal gradients [4]. Hence a high-altitude A. thaliana provides a precious natural material to investigate the evolution and adaptation process. Here, we present the genome of a new ecotype of A. thaliana collected in the Gongga County, Tibet (4200 m asl) (Fig. 1a), to demonstrate its evolutionary history and adaptation to highaltitude regions.en
dc.language.isoenen
dc.publisherElsevieren
dc.relation.urlhttp://www.sciencedirect.com/science/article/pii/S2095927317305236?via=ihuben
dc.rights.urihttp://creativecommons.org/licenses/by-nc-nd/4.0/*
dc.subjectbatch plantsen
dc.subjectTibeten
dc.subjectArabidopsis thalianaen
dc.titleDiscovery of a high-altitude ecotype and ancient lineage of Arabidopsis thaliana from Tibeten
dc.typeArticleen
dc.contributor.departmentFudan Universityen
dc.contributor.departmentTibet Universityen
dc.contributor.departmentInstitute of Forest Inventory, Lhasaen
dc.contributor.departmentThree Gorges Center for Food and Drug Controlen
dc.contributor.departmentInstitute of Mathematical Statistics, Tokyoen
dc.contributor.departmentTibet Museum of Natural Scienceen
dc.contributor.departmentUniversity of Illinois at Urbana-Champaignen
dc.contributor.departmentSoochow Universityen
dc.contributor.departmentChinese Academy of Sciencesen
dc.contributor.departmentPeking Universityen
dc.contributor.departmentYunnan Universityen
dc.contributor.departmentUniversity College Londonen
dc.contributor.departmentUniversity of Oxforden
dc.contributor.departmentUniversity of Bedfordshireen
dc.contributor.departmentShanghai Center for Bioinformation Technologyen
dc.identifier.journalScience Bulletinen
dc.date.updated2018-01-16T12:29:03Z-
dc.description.noteI'm sorry, we can't use the final publisher's pdf for this journal (http://www.sherpa.ac.uk/romeo/issn/2095-9273/), but we can use the post-print (ie final draft post-refereeing) if you have it? RVO 16/1/18-
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